Selling innovation by tax coverage in Switzerland

One year into the post-tax reform era, companies have only started to discover the use of the new incentive schemes for innovation. Initial practical experience reveals large potential benefits for businesses operating in Switzerland.

Swiss tax reform

A year ago, on January 1, 2020, the Swiss federal bill on tax reform and the legislation for implementation at the level of the cantons entered into force. That date marked the finishing line of a 14-year marathon of debate to align Swiss tax law with international rules. The result is the most significant change to the Swiss tax system in over 50 years.

The key element which the EU and OECD demanded with increasing pressure was the abolishment of the special statuses for cantonal tax purposes of holding companies, domiciliary and ‘mixed’ companies. The crux of the reform was to create OECD compliant incentives retaining Switzerland in the top group of the most attractive business locations from a tax perspective. With the introduction of a super-deduction for research and development (R&D) expenses and a tax relief for income from patents – the so-called ‘patent box’ –, two attractive tax incentives for innovation have been designed as part of the tax reform toolkit. Both special regimes are available at the level of cantonal taxes but not for federal income tax.

A federal act on tax reform provided the framework which the cantons had to fill out by amending their own cantonal tax laws. Driven by differences in the composition of their taxpayers, cantonal governments pursued diverging strategies in their tax policy: many chose a significant cut of the general corporate tax rate while others, notably Zurich, Berne, and Aargau, relied on a more targeted relief by exploiting the new special regimes to the maximum. As a result, the tax incentives for innovation have the greatest effect in those latter cantons. It should be noted that the new regimes come with a relief limitation. This provision ensures that tax is paid on at least 30% (or more, depending on the canton) of the income before special deductions (R&D super-deduction, patent box deduction, notional interest deduction, amortisation of step-up).

Table 1: Corporate income tax (CIT) rates and effect of tax incentives for innovation

City Ordinary CIT rate R&D super deduction Patent box CIT rate Relief limitation
Zurich 19.7% 50% 9.2% 70%
Basel 13.0% not available 8.4% 40%
Geneva 14.0% 50% 13.4% 9%
Zug 11.9% 50% 8.3% 70%

After the first year of the post-tax reform era, considerable differences can be observed between industries in making use of the new regimes. While pharma, chemical, and engineering businesses have quickly embraced the opportunity, the response in other sectors such as financial services has been tepid – quite undeservedly.

R&D super-deduction

For cantonal income taxes, it is possible to claim an additional deduction of up to 50% for certain expenses in relation to a taxpayer’s own R&D activities and for expenses for outsourced R&D services.

Qualifying R&D activities for the super-deduction

As the first step, a taxpayer needs to identify its qualifying R&D activities. Practical experience shows that companies and, in particular, their scientific staff often set the bar too high when it comes to characterising their activities as ‘R&D’. It has therefore proven helpful that tax specialists analyse the situation together with the company’s science department.

The definition of R&D for purposes of the super-deduction remains rather vague. The tax laws refer to the definition in the Federal Act on the Promotion of Research and Innovation which, however, provides little guidance. Greater importance is thus attached to the OECD Frascati Manual and Oslo Manual. For each type of innovation, in principle, all five Frascati criteria (cf. Illustration 1) must be met in order for the activity to qualify as R&D.

Illustration 1: Definition of R&D
according to the OECD Frascati Manual

• R&D comprise creative and systematic work undertaken in order to increase the stock of knowledge – including knowledge of humankind, culture and society – and to devise new applications of available knowledge.
• For an activity to be an R&D activity, it must satisfy five core criteria. The activity must be:

• Novel, i.e. creating new knowledge;
• Creative, i.e. based on original, non-obvious concepts and hypotheses
• Uncertain, i.e. related to the end result;
• Systematic, i.e. following a plan;
• Transferable and/or reproducible, i.e. in terms of its results.

Significant developments are taking place in the automation of business processes and in exploiting the possibilities of artificial intelligence (AI) for new products. This appears to be true for all industrial sectors whereby innovation is often about new applications covering the exploitation of research results from various scientific disciplines such as computer science, physics, geography, behavioural science etc.

The Frascati Manual requires that R&D create new findings for the company and, at best, these findings have not yet been used in the particular industry. However, the latter requirement cannot be weighted too high. Furthermore, the Swiss tax administrations attach great importance to the criterion of uncertainty regarding the success of a project. Failed projects are thus a good indicator of innovative activities. Of course, the assessment of innovation projects by mechanically applying the Frascati criteria rarely leads to clear and reliable results. All the circumstances of the innovation case as a whole must be considered.

Generally, if a company is strategically committed to innovation in a particular area and supports this strategy with substantial investments, then the chances to be in a position to apply the R&D super-deduction should be good.

Super-deductible R&D expenses

For own R&D activities, the super-deduction is calculated on the basis of the corresponding personnel expenses plus a 35% up-lift in consideration of material expenses for R&D. Following a holistic view on R&D activities instead of assessing individual projects, practice has shown that using the personnel expenses of fixed teams instead of project-related personnel costs is an acceptable approach. In addition to the personnel expenses for the actual researchers, the costs of staff with direct management and administrative functions for the R&D teams can be included as well.

Of course, innovation teams are often not exclusively dedicated to R&D activities, but also perform, for example, routine functions. Likewise, the share of R&D management in overall management tasks generally decreases at higher leadership levels. Accordingly, certain cantons tend to preclude executive board costs from the super-deduction. In practice, all these circumstances can be dealt with pragmatically by flat-rate disallowances of certain personnel expenses.

Contract R&D services

In the case of outsourced (contract) R&D, Swiss tax law in principle assigns the entitlement to the R&D super-deduction to the principal. The recipient can claim the super-deduction for 80% of the invoiced costs.

In cases where a company provides R&D services to a principal who is not domiciled in a canton where the R&D super-deduction is available, it can claim the super-deduction itself. This applies in particular to R&D services performed in Switzerland for the benefit of a foreign recipient.

In principle, R&D services between group companies can be charged at full cost and including an appropriate mark-up. In general, this leads to a much higher qualifying expense at the level of the principal than if it carried out the R&D itself and could claim the personnel expenses only. When it comes to (tax) planning of R&D functions within a group of companies, this is an aspect to be carefully considered.

Patent box

Many countries provide for tax incentives in the form of lower taxation of income from intellectual property rights that is accounted for in a separate segment – generally referred to as patent, licence, or IP box. The Swiss variant is in line with the minimum standard set by the OECD BEPS Action 5 Report in that it adopts the modified nexus approach and defines the qualifying IP rights slightly narrower than the report.

Within the patent box, the net income from exploiting patents and similar intellectual property (IP) rights is carved out. A company may generate such income by granting licenses and selling patents or by selling goods and services that are based on patents. The patent box profit, multiplied by the nexus ratio and the relief factor (different depending on the canton), produces the tax-exempt income.

Qualifying IP rights

The type of IP rights which qualify for the Swiss patent box are the following:

  • Swiss patents;
  • European patents with designation of Switzerland;
  • Patents for inventions in other jurisdictions, utility models; and
  • Comparable IP rights such as supplementary protection certificates and regulatory data protection for pharmaceutical products and pesticides.

Although not explicitly mentioned in the law, revenues generated on the basis of exclusive licenses for the use of patents on Swiss territory also qualify for the box.

By simply relying on the domestic or overseas registration of a patent, the law provides a clear and fairly easy to handle criterion to qualify the rights. On the other hand, patent applications, expired/revoked patents, brands, designs, copyrights, and trade secrets do not qualify. An important topic in this context is software. Under Swiss IP law, software can be protected by copyrights but not by patents, unless it is a component of a patented product (computer-implemented invention). As a result, software will only qualify for the box if it is part of a patented invention or patented abroad in its own right.

Illustration 2: Factors to compute the patent box deduction from taxable income

(Click to enlarge)


1) Depending on chosen patent box perimeter: income before tax of the company, of the product family, or of the product.
2) To be eliminated if such items are included in the chosen patent box perimeter.
3) According to the OECD standard, the part of the profit pertaining to non-qualifying IP such as brands needs to be eliminated. Oftentimes around 0-1% of patent box revenues.
4) R&D expenditures borne by the company in Switzerland (nexus) in the current and 10 preceding years for the IP of the respective patent box: own R&D expenditures as well as expenditures for contract R&D by Swiss group companies or by Swiss/foreign third parties.
5) Total R&D expenditures borne by the company in the current and 10 preceding years for the IP of the respective patent box, i.e. including expenditures for IP acquisition, for contract R&D by foreign group companies etc.
6) ‘Up-lift’ to the extent of the actual expenditures incurred by the company for IP acquisition and by foreign branches and group companies for R&D in support of the respective patent box, up to 130%. Overall, the nexus ratio cannot exceed 100%.
7) Depending on canton (90% in Zurich, Basel-City/Country, Berne, Zug, Schwyz, Aargau, etc.; 10% in Geneva, Lucerne, etc.)

Computing the patent box deduction from taxable income

When applying the patent box, a company first needs to choose the perimeter of one or more boxes. Among other factors, this choice is driven by the stage of development of the different products and by the capabilities of the enterprise resource planning system in terms of data granularity.

Where the indirect method of computing the patent box profit is used, the idea is to eliminate all revenues from the box profit that are not directly linked to a patent. Experience shows that there is need for discussion with the tax authorities regarding the distinction between qualifying and non-qualifying revenues. For instance, in financial services, certain parts of the investment result may be generated on the basis of a patented solution and should thus not be removed from the box like the financial result in other industries. In some cases, where the indirect method is difficult to apply, it is also possible to determine the qualifying profit by way of a ‘synthetic’ direct computation: On the basis of a transfer pricing study, the company may establish the amount of license fees which third parties would agree for the use of comparable patents.

Practical challenges

When IP rights are first allocated to the patent box, the expenditures for the development of such IP, for which a tax deduction has been claimed in the preceding 10 years, are recaptured for tax systematic reasons. The Swiss cantons take different approaches, which allow in most cases to mitigate upfront tax costs of the entry into the patent box. However, this makes careful planning of the entry necessary. The recapture as well as the ongoing computation of the nexus ratio require a relatively time-consuming tracking and tracing of R&D expenditures. Automation is key in this space to make the application of the patent box efficient.


For companies that engage in innovation, the R&D super-deduction and the patent box may provide an opportunity for significant tax savings. These tools give a reason to reassess innovation and patent strategies from a tax angle. Companies are well advised to analyse how to best benefit from the Swiss innovation toolkit. They should also make use of the possibility and standard practice in Switzerland to negotiate and get an advance ruling from the competent tax authorities. In terms of implementation, the Swiss tax authorities are generally cooperative and receptive to pragmatic solutions.

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Thomas Nabholz

Meyerlustenberger Lachenal
T: +41 44 396 91 96
E: [email protected]

Thomas Nabholz is a partner at Meyerlustenberger Lachenal, where he
leads the tax practice. He is a certified Swiss tax expert with more
than 20 years of experience in Swiss domestic and international tax law.

Thomas advises corporate clients from various industry sectors, as
well as private clients and financial investors in national and
international tax planning. His focus areas are corporate restructurings
and mergers and acquisitions (M&A), corporate finance, private
debt/equity, as well as private wealth structuring.

Before joining the firm in October 2019, Thomas co-headed the Swiss
financial services international tax and transaction tax services
practice of a Big Four firm. His career in corporate taxation includes
in-house experience from medium and long-term assignments to the group
tax departments of Swiss Re, UBS and Swarovski.

Julian Kläser

Senior associate
Meyerlustenberger Lachenal
T: +41 44 396 91 44
E: [email protected]

Julian Kläser is a senior associate and tax expert at Meyerlustenberger Lachenal.

Julian’s practice focuses on Swiss domestic and international tax
law for corporates and individuals. His clients include start-ups,
technology companies and investors with a focus on blockchain,
distributed ledger technology (DLT) and digitalisation. He also has
particular experience in tax matters related to high-net worth
individuals and the tax aspects of their private and business activities
worldwide. Additionally, he advises clients on Swiss VAT and customs.

Julian holds a doctorate in tax law, and regularly publishes
articles and lectures in his fields of expertise. He has been appointed
as a lecturer in professional development courses concerning federal tax
law organised by the Swiss Federal Tax Administration and the
University of Berne, as well at Kaleidos University of Applied Sciences,
where he gives classes on international individual taxation covering
trusts and similar structures.

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